Heat map of the Spearman correlation matrix of the liver cancer tumor ...
Liver cancer cells (HepG2 and VX2) and macrophages (THP1) were cultured under hypoxic (0.1% O2) and normoxic (21% O2) conditions with varying glucose levels (2 g/L or 4...
A single-cell atlas of liver metastases of colorectal cancer reveals ...
2021年9月7日 · Based on 111,292 single-cell transcriptomes, our study reveals that TME of treatment-naïve tumors is characterized by the higher abundance of less-activated B cells and higher heterogeneity of tumor-associated macrophages (TAMs).
Comprehensive and Integrative Genomic Characterization of ...
2017年6月6日 · Multiplatform clustering analysis identified three integrated molecular subtypes of liver cancer (A) Heat maps organized by iCluster groupings for DNA copy number, DNA methylation status, mRNA expression, and miRNA expression, and correlated with selected molecular features (top tracks). Tumors are in columns, grouped by the iCluster membership.
Computational analysis for identification of early diagnostic ...
2021年7月8日 · Liver cancer is the sixth most commonly diagnosed cancer and the fourth most common cause of cancer death. The purpose of this work is to find new diagnostic biomarkers or prognostic biomarkers and explore the biological functions related to the prognosis of …
Heat map comparing the liver cancer group with the normal …
The heat map analysis is shown in Fig. 1, and the darker colors represent the higher gene expression levels. The volcano plot shows the distribution of the differentially expressed genes...
Computational analysis for identification of early diagnostic ...
2021年7月8日 · Volcano maps and heat maps of DEGs obtained from GEO and TCGA databases. Packet pheatmap, packet ggplot2 and other R packets were used to draw heat maps and volcanic maps of DEGs.
Expression of circMTO1 in liver cancer tissues and cells. (A) Heat map ...
(A) Heat map of differentially expressed circRNAs in liver cancer tissues. N: normal tissue adjacent to the tumor; T: tumor tissue. Red indicates high expression and blue indicates low...
An invasive zone in human liver cancer identified by Stereo-seq ...
2023年6月19日 · Using a novel tumor border scanning and digitization model enabled by nanoscale resolution-SpaTial Enhanced REsolution Omics-sequencing (Stereo-seq), we identified a 500 µm-wide zone centered ...
Focal liver lesion diagnosis with deep learning and multistage CT ...
2024年8月15日 · LiLNet identifies focal liver lesions, including hepatocellular carcinoma (HCC), intrahepatic cholangiocarcinoma (ICC), metastatic tumors (MET), focal nodular hyperplasia (FNH), hemangioma...
Identification of hepatocellular carcinoma-related subtypes and ...
2023年8月9日 · Differential expression of FRGs was examined for TCGA-LIHC transcriptome data using Wilcoxon and presented in box plots. Heat maps of DEFRGs were drawn utilizing the ggplot2 package and the pheatmap package to visualize the expression of FRGs in the samples. Subsequently, the correlation between DEFRGs was analyzed using Pearson correlation ...
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